bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2140_orf2
Length=241
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0132 64.7 2e-09
> 5833.PF08_0132
Length=1397
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query 45 QFAQVQQLLLQKGWFAEPVATEHLLDYYNHLGLNEFYFKAASPKSIADNLLAVIAARALH 104
++ Q ++LL F++ + + Y+N LG N+F+F+ SP+ I+ ++ +I A+
Sbjct 35 KYEQTKELLKSYNLFSDHLINYSIDFYFNKLGFNKFHFEETSPELISKVVVCIITAKINE 94
Query 105 SVSGDDYFPEIRQRDERSGDVFALAKASLTASGAPRNYLVERAFE---LQFLDMGWGLRA 161
S D YFP + + +F + + + NY +E+ E F DM
Sbjct 95 QYSSDKYFPTFEETHDNV--IFIITRVFADDNKTRLNYKMEKKIEEKYFNFSDMS----- 147
Query 162 PPQQQQRQQQQQRQQQRRRKQQMRMQCYRSTGSVFGMDGG-AERLRTYFFQVAKFPKRPE 220
K R++ +RS SVF + E LRTY ++ + +
Sbjct 148 -------------------KDCYRLKSFRSVHSVFDKEHTYQEPLRTYILELPTY--NDD 186
Query 221 QLSPKEKDLSLLLDTDFY 238
+ E DL L+D +FY
Sbjct 187 IIKENETDLKKLMDVNFY 204
Lambda K H
0.320 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 71080705449
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40