bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2148_orf1
Length=340
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF0170w 421 2e-116
> 5833.PFF0170w
Length=441
Score = 421 bits (1081), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 216/322 (67%), Positives = 264/322 (81%), Gaps = 2/322 (0%)
Query 5 VFSFNFAALIPLSALLGAFTEELSLHTGEITGGLLNATFGNAVEMIMSVQALRIGLLEVV 64
+F FNF LIPLSAL+G TE+L+LHTGEI GGLLNATFGN +EMI S+QAL GL+ VV
Sbjct 120 IFFFNFMVLIPLSALMGHVTEDLALHTGEIIGGLLNATFGNLMEMIFSIQALNAGLINVV 179
Query 65 KGTLLGSILSNLLLVLGMSFFAGGLHHYLQKFNEKGATCSVTLLLLSCMGIVIPTVAAVD 124
+GTLLGSILSNLLLVLGMSFFAGGL+H++QKFNEKGATCS +LLLLS + I IPTV++
Sbjct 180 QGTLLGSILSNLLLVLGMSFFAGGLYHHIQKFNEKGATCSTSLLLLSSLAITIPTVSSFT 239
Query 125 NGQHGTYNILMISRITALLIGVTYCLFLFFQLYTHIGLFKDDDEDAEQWPMMSWEAATLM 184
+ IL +SRITA+LI VTYCLFL FQLYTHI LF+D E E+ P +S + ++
Sbjct 240 TNNNLDV-ILKVSRITAVLIFVTYCLFLLFQLYTHISLFQDK-EMTEEIPQLSVISGSIF 297
Query 185 LFLVTSLVALHSELLVSSIEEVVADYGLSESFIGVILLPIVGNAAEHLTAVTVAMKNKVD 244
L L+T LV++HSE L+ SI+ V+ Y +SE+FIGVILLP+VGNA EHLTAVTVAMKNKVD
Sbjct 298 LILITLLVSIHSEFLIYSIDSVIKYYNISENFIGVILLPVVGNATEHLTAVTVAMKNKVD 357
Query 245 LAMGVAVGSSAQIALFVFPFTVLVAWVMGQPLTMAVQPLSAVVMLLSVLVAMAVVQDGES 304
L MGVAVGSSAQIALFV P TVL W++ +P+T+A PLS V++++SV+V MA+VQDGES
Sbjct 358 LTMGVAVGSSAQIALFVVPVTVLFGWILNKPMTLAFSPLSTVILVISVIVTMAIVQDGES 417
Query 305 NWLEGVMLMAAYLIISVVFWFD 326
NWLEGV+L++AYLI+ VVFWFD
Sbjct 418 NWLEGVLLISAYLIVGVVFWFD 439
Lambda K H
0.325 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 125568424587
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40