bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2153_orf1 Length=251 Score E Sequences producing significant alignments: (Bits) Value 4932.YGR109W-B 75.9 1e-12 > 4932.YGR109W-B Length=1547 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 93/249 (37%), Gaps = 72/249 (28%) Query 58 PKRPHD-------HHILLAPGKLPARSAIYRMTPDQLTFHKQETAKLSDNGWIGPTYSPI 110 P RP D H I + PG R Y +T + KL DN +I P+ SP Sbjct 573 PPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPC 632 Query 111 CSPTTMVDKRDDGSGERKMRMVVNYQALNALTIAPDFPLPSIQ------------TILEL 158 SP +V K+D R+ V+Y+ LN TI+ FPLP I T L+L Sbjct 633 SSPVVLVPKKDGT-----FRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDL 687 Query 159 LGG---------------------------------------AKY---------FSTLDL 170 G A+Y F + L Sbjct 688 HSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYL 747 Query 171 DDVLIYSSDLSEHVSLLRQVLSIFLRHQFYPKFRKCKFARQTITYLGYTVSAAGIKPAED 230 DD+LI+S EH L VL K +KCKFA + +LGY++ I P + Sbjct 748 DDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQH 807 Query 231 KIEAIRLWP 239 K AIR +P Sbjct 808 KCAAIRDFP 816 Lambda K H 0.320 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 76235559246 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40