bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2182_orf1 Length=127 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.35 61.6 7e-09 > 5833.MAL13P1.35 Length=453 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 2/87 (2%) Query 42 TLRISNLDPSVILDQLRYDLFELCKPFGEVLEVIAKRE--KRGEALVVFADEEAAAKAYM 99 TL I NL+ V D+++ +L +L +GE+ ++I + ++G+A VV+ D+E A KA Sbjct 176 TLYIKNLNDRVKTDEMKKNLKDLFNTYGEIKDLIVMKSFWRKGQAWVVYDDKECATKALN 235 Query 100 ALQGQTLYGKTLRVDLADNPPPLQAEK 126 ALQG L+GK ++++ + N + A++ Sbjct 236 ALQGYVLFGKIMQINFSHNKSDIHAKR 262 Lambda K H 0.317 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22506847341 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40