bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2195_orf1
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0021 65.5 5e-10
> 5833.PF13_0021
Length=211
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 14/106 (13%)
Query 38 LLQWPASSSSSSNWFSHSSCIPRLDIRDTGDNLLLHADLPGLDKKDIKVETQNGRLIIRG 97
LL P SS + +S+ +P +D+ D +L + D+PGL+K+D+++ +G+L I G
Sbjct 86 LLSKPFSSMFRRDGYSN---VPAMDVLDKEKHLEIKMDVPGLNKEDVQINLDDGKLEISG 142
Query 98 HSSSSSSSSSSPQQQQQQQQQQDGRWFVQERCSSSFFRSLPLPPEA 143
S +Q+ +QQ R++++ERC SSF+RS LP
Sbjct 143 EFKKS-------HEQKDEQQ----RYYIKERCESSFYRSFTLPENV 177
Lambda K H
0.310 0.123 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22567178795
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40