bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2215_orf1 Length=475 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0028 271 4e-71 > 5833.PF14_0028 Length=655 Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 157/475 (33%), Positives = 241/475 (50%), Gaps = 47/475 (9%) Query 2 TPKRMPGRPGQKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALEN 61 T + G+ +EIDSFLEEIK +Q++ +++ L E+ L+++EEE+ + +I +E Sbjct 94 TTENKNNTVGKVKEIDSFLEEIKLKQKILDERKSLKEKSQLAKSEEEKIKINKKITEIEQ 153 Query 62 ATRPRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRR 121 P KE NLYLGNLSPE+TEE+LCQ+FGK G + SVKIMYPR +E+K++ Sbjct 154 NENLLSYIP---RKEKIANLYLGNLSPEVTEEYLCQKFGKFGKVNSVKIMYPRKDEDKKK 210 Query 122 NRNCGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPF 181 R GFV FE AE+AK++LDG G +IRIGW KA+ P FG Sbjct 211 ARISGFVCFENIEDAENAKDALDGVEMCGNIIRIGWSKAI-PKFGYN------------- 256 Query 182 PSSGFSPPPPSAFSAEVPTATPTPPPPPEAELVEVQVPKDRKVKMVIDLLAKYVAEEGHV 241 + S ++ + + ++ +P D+K K +IDLLAKYV EEG+ Sbjct 257 -----TKNEISNYNMDKYNTYNNVNVNKKVIII---IPDDKKTKRIIDLLAKYVTEEGYS 308 Query 242 FEQQVMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRW 301 FE+ + EK ++ +F++E S YY+WRV++F QGD+ + WR +PF I+S G + Sbjct 309 FEETIKEK-EKDNPIFHFLFE-SSDLFYYYKWRVFSFAQGDSYKNWRTDPFHIFSNGYLY 366 Query 302 AAPPEKYFQQPAKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAM 361 PA +K + + + +L +L + + R SIC AM Sbjct 367 VP--------PAIEKKNKGLLIKRKRGRNKRRHIDEKKKNKLINILSTLNKKRVSICRAM 418 Query 362 SFCMSHGSSSAEVCSCLTESLTLP--DTALTMRLARTYLLSDLLANSSAQTAHAWTYRYH 419 FC H S ++ ++ LT D +++ YLLSD+L N S + +W+YR H Sbjct 419 IFCTRHSDYSLDIIKIISNFLTDVKYDLLKKVKINLIYLLSDILYNCSNEFFSSWSYRKH 478 Query 420 LEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVY 474 +E LP I K ++ + G + +L + +W W +Y Sbjct 479 IEDELPRIFYFLRKHIKKVDSKIKG----------KLFIDSLINIFNMWNCWAIY 523 Lambda K H 0.316 0.133 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 201567787827 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40