bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2261_orf3
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT5G10810.1 112 2e-24
> 3702.AT5G10810.1
Length=109
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 71/101 (70%), Gaps = 0/101 (0%)
Query 38 QQHTILLVQFGDRRETKTYMEFASVAAAMNGVCQLYEQALKGAEPRLRQITYDVNDLFSY 97
+HTI+L+Q R T+T+M++ S+ AM+G+C LYE+ LK P LR I+YD+ DL+++
Sbjct 7 SRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADLYNF 66
Query 98 LDSLNDLCALVHDSELNAYAPHNKAWIKDQVFKHLKRQARA 138
+D L DL ALV+D ++AY P+++ WIK + F HLKR A
Sbjct 67 IDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIANG 107
Lambda K H
0.320 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22344559178
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40