bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2263_orf1 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_3790 128 6e-29 > 5807.cgd7_3790 Length=816 Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 60/125 (48%), Positives = 92/125 (73%), Gaps = 1/125 (0%) Query 15 RDKNIAAARDIFVLSVVRFRLVASQLYQDVEISKGKLMKGQLIGSQFMQRLKNLATIIQE 74 ++K++ A + V+ +LVA L++DV + +GK+ KGQLIGSQFM L +L +I+ E Sbjct 592 KNKDVLRAELVEVVQKSSNKLVA-DLFKDVFVERGKMAKGQLIGSQFMNSLGSLMSIVNE 650 Query 75 TEPHFIRCTKPNDQQQPKLFIGRKVLPQLRALSVTEAIQLRSVGYSYRRPFADFLRQFRL 134 TEPHFIRC KPN+ ++P ++ KVL QL +LS+ EA+QLR++G+SYRR F++F+ QF+ Sbjct 651 TEPHFIRCVKPNESKKPLDWLASKVLIQLHSLSILEALQLRNLGFSYRRTFSEFIYQFKY 710 Query 135 LNISA 139 ++SA Sbjct 711 CDMSA 715 Lambda K H 0.322 0.136 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40