bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2283_orf1 Length=172 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL2235w 89.7 3e-17 > 5833.PFL2235w Length=390 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 24/163 (14%) Query 15 RVIFRDREGRIISEEEWL---------TLEGAKGRKRQRERGPAPVLEWGAGLKQKEDLE 65 + I+RD+ G+IIS E+W+ K +K+++E LEW GL QK+ + Sbjct 223 KTIYRDKSGKIISREKWIEEQKKEMKYKHGKYKDKKKKQEEEKKRKLEWDGGLVQKDIRQ 282 Query 66 ARKKEEEK-IAKQPFARYDIDEEHDAELRARDRWDDPLAKAPSNTAQGLGRKQKGKEDVD 124 +E EK I K+ Y+ D ++D EL+ + R DDP+ L K++ +E+ Sbjct 283 KNIEENEKLIKKKNIINYEFDSDYDIELKMKKRKDDPMNIY-------LEAKEENQEN-- 333 Query 125 REKKHQRPKCPHDAPPNRFGIKPGYRWDGVVRGNGYEEERLKA 167 ++ C + +P NRF I+ GYRWDGV+RGNG+EE RL+A Sbjct 334 -----KKLTCRYQSPYNRFNIQAGYRWDGVIRGNGFEERRLEA 371 Lambda K H 0.313 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 32857020181 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40