bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2286_orf1
Length=243
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd4_1270 81.6 2e-14
> 5807.cgd4_1270
Length=278
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query 102 VAGLVSTTNGDGSDLQGLF--EAPAGDSGVDSLRLDSDGNLVVADGPKEVFCCRCLGMSG 159
G+ N + S L LF + GDS L +D G++++ + + + G
Sbjct 115 FEGINGENNSNNSFLSELFSMDKLNGDSNS-KLSIDCKGDIILEENLLNNSSGKQMDWLG 173
Query 160 LLGGGCMCTSGQQRRVLEEDLTSRGAFVLQPYEGAYKKTKGKRWTEEETRKFYECLSSCG 219
L+ G R + E++ LQPY GAYK+TKGKRW+ E+T KFY+ LS G
Sbjct 174 LMEG---------RVYINENMAGTS---LQPYSGAYKRTKGKRWSTEQTNKFYDALSLFG 221
Query 220 TDLLLIRTMMPGVTDGQLKRKLK 242
TDL+L++++ P TD Q+ K K
Sbjct 222 TDLMLVKSVFPEFTDKQIHDKFK 244
Lambda K H
0.315 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 71395206278
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40