bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_2299_orf2
Length=221
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFI0635c                                                       94.4    3e-18


> 5833.PFI0635c
Length=147

 Score = 94.4 bits (233),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query  13   MAKGLRCKTKRAFRAVKRQHVSPTVEAARMQALQQRLHMVQQGQDPMQLNKRPLNKFLHP  72
            M KGLR K KR FR +KR HV   VE   ++ L  R+  +   +D  Q   RP NKFLHP
Sbjct  1    MGKGLRSKVKRRFRTIKRIHVREHVEKPNLKKLNDRIKSMLNNKDIYQDLVRPPNKFLHP  60

Query  73   DAPDAVFPQKTPGPRPLDFRSESLPLAGLVGWGQRKKFTEEEKVELVSIFNCLPGRTEGS  132
            D  +AV PQ     + +DFRSE+LPL+G    G R+K+   E++ L + F       E +
Sbjct  61   DDENAVIPQHKI-TKKIDFRSEALPLSGFATVGNRRKYNLTEQMSLKNEFGGNANFFENT  119

Query  133  QVQKARETLRR  143
            +V K  E + +
Sbjct  120  EVSKMIEEMHK  130



Lambda     K      H
   0.317    0.130    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 59781045954


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40