bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2341_orf1
Length=268
Score E
Sequences producing significant alignments: (Bits) Value
335543.Sfum_2808 223 3e-57
> 335543.Sfum_2808
Length=379
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/240 (49%), Positives = 157/240 (65%), Gaps = 6/240 (2%)
Query 29 LYLDYNATTPVDPAVFAALSPFLQERFGNPSSKHAVGVDAAGALRAAREAAAAALGAPPC 88
+YLDYNATTP+DPAV A+ P++ E FGNPSS+HA GV A A++ AR A L P
Sbjct 6 IYLDYNATTPIDPAVARAMLPYIHEHFGNPSSRHAYGVTAWNAVQKARGQIAEMLHCAPE 65
Query 89 SIIFTSGATESINWALKSGAKLKRLKGPSPGRIVTCAMEHPAVLRVCEYLRDEEGFELIL 148
I+FTSG TES N A+K A R +G I+T +EHPAVL VC+YL + GF +
Sbjct 66 EIVFTSGGTESNNHAIKGIAFANRARG---NHIITSVIEHPAVLEVCDYL-ESLGFRVTR 121
Query 149 CPVLSSGLIDLGAFKALLTADTILISIPLANGEVGVVQPIREVVSVARRICPDALVHADA 208
PV GL+D + +T +TIL+++ AN EVG ++PI E+ ++ARR +H DA
Sbjct 122 LPVDRHGLVDPRRAEEAITPETILVTVMHANNEVGTIEPIAEIAAIARR--HGVPMHTDA 179
Query 209 SQAMGKVAVQPVSLGVDLLTVAGHKVYAPKGVGALYIREGINLPPLILGGGQESGLRGGT 268
+Q++GK+ V+ LGVDLL+VAGHK+YAPKGVGALY+R G+ L + G G E R GT
Sbjct 180 AQSIGKIPVRVDELGVDLLSVAGHKLYAPKGVGALYVRSGLTLEKFVHGAGHELNRRAGT 239
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 85563639990
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40