bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2407_orf1 Length=172 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_2580 177 1e-43 > 5807.cgd3_2580 Length=394 Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 83/173 (47%), Positives = 124/173 (71%), Gaps = 5/173 (2%) Query 2 RCLFFGRLSSEATEEVLKSICEQFGDIRKITTYPEKHMAFVEFYDIRHAEAAREALRATE 61 R L+ +L + TE+ ++ +CE FGD++K+ YP K +AFVE++DIR AE AR L+++ Sbjct 75 RTLYLCKLPYDMTEDSVRELCEPFGDLKKVAVYPRKGIAFVEYFDIRKAEGARNTLKSSL 134 Query 62 IAGKRAEVQYSAIK--RPDKDSNMGTLYIRPTNGMSSSTTLSDPHSLDAYRRLFSSYGDI 119 + G+ + QYS + RP +D+N GTLYI+P + S+ T +DP++ D Y+ LF +YG++ Sbjct 135 VQGRIIDAQYSRGRDGRPSRDTNTGTLYIKP---IVSNKTATDPNTEDDYKELFCAYGEV 191 Query 120 KKVSVNRKRDSEKFVEYHDVRDAAKALEALNGHNFNGVTLQICFAQNASRTFN 172 KKVS NRKR+SEKFVE++D+R A + +ALNG++FNGV L+I FA SRT N Sbjct 192 KKVSSNRKRESEKFVEFYDIRGAEASQKALNGYDFNGVILEIQFANTHSRTLN 244 Lambda K H 0.319 0.132 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 32857020181 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40