bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2410_orf1
Length=506
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0104 749 0.0
> 5833.PF14_0104
Length=465
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/457 (77%), Positives = 405/457 (88%), Gaps = 0/457 (0%)
Query 48 DHLLPQDLSKLDVSKLTPLSPEVISRQATINFGTIGHVAHGKSTVVRAVSGVQTVRFKHE 107
D L Q+L LDV+KLTPLS +VISRQATIN GTIGHVAHGKST+V A+SGV TVRFKHE
Sbjct 7 DKLAEQNLETLDVTKLTPLSEDVISRQATINLGTIGHVAHGKSTLVHAISGVHTVRFKHE 66
Query 108 KERNITIKLGYANAKIYKCTNPNCPPPECYCSYGSAKEDDPPCLREGCGAKMKLMRHVSF 167
KERNITIKLGYANAKIYKCTNP+C PPECY SY S+KED+P C R+ C +MKL+RHVSF
Sbjct 67 KERNITIKLGYANAKIYKCTNPDCLPPECYKSYESSKEDNPICPRKDCNHEMKLLRHVSF 126
Query 168 VDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAVEIMRLQHIIILQNKV 227
VDCPGHDILMATMLNGAAVMDAALLL+AGNESCPQPQTSEHLAAVEIMRL+HI+ILQNKV
Sbjct 127 VDCPGHDILMATMLNGAAVMDAALLLVAGNESCPQPQTSEHLAAVEIMRLKHILILQNKV 186
Query 228 ELIKESQALQQQQEIKQFVAGTAADKAPIIPSSAVLKYNIDILCEFICTLVPVPHRDFTR 287
ELIKE QAL+QQ+EI+ FV+GTAAD APIIP SAVLKYNID++CE+I T + +P RDF
Sbjct 187 ELIKEEQALKQQEEIRNFVSGTAADSAPIIPISAVLKYNIDVVCEYIVTQISIPKRDFIS 246
Query 288 PPQLIIIRSFDVNKPGEEAEKLQGGVAGGSISEGLLKVGDQIEVRPGIITKDASGFIQCR 347
P +I+IRSFDVNKPGE+ E LQGGVAGGSI G+LKVGD+IE+RPGII+KD G I CR
Sbjct 247 SPHMIVIRSFDVNKPGEDIETLQGGVAGGSILHGVLKVGDKIEIRPGIISKDDKGEITCR 306
Query 348 PIASQVHSLFAEENPLQFAVPGGLIGVGTGIDPTLTRADRLVGQVLGHPQQLPDCFIEID 407
PI SQ+ S+FAE N L++AVPGGLIGVGT IDP LTRADRLVGQV+GH +LPDCF EI+
Sbjct 307 PIISQILSMFAENNNLKYAVPGGLIGVGTKIDPILTRADRLVGQVIGHLNKLPDCFAEIE 366
Query 408 VNYYLLRRLLGVKSQEGDKSTKVSKLKKGEFVMVNIGSTSVGARVAGVKPEVAKLELTGP 467
++YYLLRRLLGVKSQ+G+K+TKV+KLK GEF+M+NIGSTS+G RV G+K E+AKLELTGP
Sbjct 367 ISYYLLRRLLGVKSQDGEKNTKVAKLKNGEFLMINIGSTSIGCRVTGIKTELAKLELTGP 426
Query 468 VCTRVGDKVALSRRVDKHWRLIGWGQINKGKTLLLQE 504
VCT++GDK+ALSRRVDKHWRLIGWGQINKGK L LQE
Sbjct 427 VCTKIGDKIALSRRVDKHWRLIGWGQINKGKPLELQE 463
Lambda K H
0.319 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 218271361549
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40