bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2412_orf5
Length=324
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE0885w 281 2e-74
> 5833.PFE0885w
Length=716
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 212/326 (65%), Gaps = 8/326 (2%)
Query 1 VKGAAMHWQGNGDFLCLRTMVFKKTGKKGRKEFSQLEIFRMREKDIPVDNLQLNDIAV-Q 59
V A++HW GD+LCL+T + KK+GKK +KE++QLEIFRMREK+IPVDN+Q+ + Q
Sbjct 397 VSVASIHWHNKGDYLCLKTTIQKKSGKKIKKEYTQLEIFRMREKNIPVDNVQIEAVKTKQ 456
Query 60 LHWEEGPSKRFVLVVQEEGTTNQSLRFFRVADAAEGNVETNKRDTIMTHSFDIPNYMNFL 119
HWEE S RF L+++EE T Q +RF+++++ RD + +FDI N MNF+
Sbjct 457 FHWEESNSNRFALILREETTNKQQIRFYKISNKGTA------RDAKWSSTFDINNQMNFM 510
Query 120 KWSPFGSYFVLASLSTYGTVMFCHLNDQDKVEVLHQDEHYMCNEVRWSHCGRYLATCVVM 179
KWSP G+YF+LASL++ GT+ FC LN+ D+V+V+H+DEH + N + WS CGR+L + V
Sbjct 511 KWSPQGTYFILASLASEGTLYFCCLNNNDEVDVIHKDEHLLVNSISWSRCGRFLVSAVSN 570
Query 180 PLVSGAQAYRFGDN-TGFNIWTFQGKLLEKTKKENFYQFLWRPHPPTLLTEKQLDDIKKR 238
+ YR ++ GF+IWTFQGK L + KK +F QFL+RPHP +L +K DIK
Sbjct 571 NPNAFNTGYREENSEAGFHIWTFQGKCLMRIKKPSFIQFLFRPHPKSLFNDKLKLDIKNN 630
Query 239 MKEHSKRYEAEDERLRSEKRRAFLKQREEESEKFQQILDELEAWKMKHPKYEEWCRAQEE 298
+ +SK+++ DE++++ K+ A L +R+ F Q E+ A + +YE+ + E
Sbjct 631 LNNYSKKFDNIDEKMKTAKKNALLTERKNVENSFNQKFQEITALFQSYQEYEQLKKNWET 690
Query 299 FDTWFEWEYKEEIIEEELDVKQEVIC 324
F+ FEWE K +IE L VK+E+
Sbjct 691 FENQFEWEEKTIVIEHVLSVKEEIFA 716
Lambda K H
0.320 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 117128481428
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40