bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2436_orf3
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0022 196 9e-49
> 5833.PF13_0022
Length=262
Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 137/210 (65%), Gaps = 9/210 (4%)
Query 2 VASAQTILHRFYYRKSLKKFDVRLVATASLLLACKLEEDPRRVKSLIDVVHILSKAEDTN 61
+ ++Q + HRFY++KS FDV ++A ++L L+CKLEED R+ +I+ H L K E+
Sbjct 50 IVTSQILFHRFYFKKSFTDFDVNIIAPSALYLSCKLEEDFCRIYKIINTFHFLCKYENIK 109
Query 62 K-----DITLENLDELLLDHDSTEFELARSETFRCERYILRELGFMVSQTLVHPHRYILQ 116
DI N + ++ +S E++ + + + E IL+E+GF+V + HPH ++L
Sbjct 110 SKHIYFDIKNLNPEHFRINIESEEYKNMKVDIYTYELLILKEIGFLVHKINQHPHSFLLP 169
Query 117 YIHALCKG-DYIP---TNRLSQIAWGYLNDSMRTTLCCEVQPAVVAVGSIFLAACDLSIP 172
YIH+L + I T +L+Q++WG+LNDSMRTTLCCE QP +AV SIFLAA L+IP
Sbjct 170 YIHSLFNNLNTIHKDLTKKLAQMSWGFLNDSMRTTLCCEYQPRCIAVASIFLAAYKLNIP 229
Query 173 LAKETGWYELFDVSWEDVVKVCTRILSLYK 202
L T W++LFDV +ED+ K+C RIL LYK
Sbjct 230 LMNNTNWFKLFDVEYEDIKKICIRILELYK 259
Lambda K H
0.317 0.128 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 114140509963
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40