bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2440_orf1 Length=121 Score E Sequences producing significant alignments: (Bits) Value 7227.CG2863-PA 131 5e-30 > 7227.CG2863-PA Length=488 Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 0/120 (0%) Query 1 RQIFKINFRPLASFRVSPVTRCSSALPGHEEAILATAFSPEGSRLATAGGDTTVRLWDLN 60 + I ++P A F+V PVTRC+S++PGH EA+++ FSP+G+ LA+ GDTTVRLWDLN Sbjct 90 ENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLN 149 Query 61 TETPLKTLRAHSNWVLCVSWAPHGQLLASAGMDGTVCIWDPEGPQAASDKFGVAAAALSC 120 TETP T H WVLCVSWAP G+ LAS G++ IWDPE Q ++C Sbjct 150 TETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINC 209 Lambda K H 0.320 0.132 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22998535989 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40