bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2441_orf1 Length=326 Score E Sequences producing significant alignments: (Bits) Value 243090.RB11207 80.9 5e-14 > 243090.RB11207 Length=538 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 27/246 (10%) Query 88 VQLGLLGVAVSACFIILFLLPFKDVLRQVVEHQKGS-----PLTYALTYVVAG-LVVPAP 141 V+ G + + V + +I+ LPF DV+ + GS P+ L Y+VA L VP Sbjct 14 VRWGSIAIVVVSLLVIIRTLPF-DVVTSAMNEWIGSLGWWGPVVLVLLYIVATVLFVPGT 72 Query 142 LLSVLAGVLMGPSLLAVFVIMCGSMGAACLAFFISRFMLRRFVVNRFVRRSKQLQAIDLA 201 +L++ AG + G L+ V+ GS A LAF ISR++ R V + + +++ AID A Sbjct 73 ILTLAAGAIFG-LLVGTIVVSIGSTIGAALAFLISRYVARERVA-KLAKDNRRFAAIDRA 130 Query 202 LQKDSVKLVLCTRM--ILPFTFNNYFLGTTPISAATFAVSTLVTGIPFAVLYAIIGGQLQ 259 +++ K+V R+ LPF NY G TPI + +++ + +P LY +G Sbjct 131 IEEGGWKIVGLLRLSPALPFNLQNYLYGLTPIRFWPYVLTSWIAMLPATFLYVYLG---- 186 Query 260 SLDNALAAKSFELQGADVDVFGFFTMSKRHLEVIGICGGILLCFFVVR-TIKRFAAQVVL 318 + GA V T ++ + +G+ I + +V R ++ QV Sbjct 187 -----------HVTGAAVGADRERTTAEWAMLAVGLLATIAVTVYVTRLASQKLDEQVDQ 235 Query 319 EAQEVA 324 + +E A Sbjct 236 DQRENA 241 Lambda K H 0.330 0.141 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 118323670014 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40