bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2479_orf1
Length=190
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT5G42890.1 79.3 6e-14
> 3702.AT5G42890.1
Length=123
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query 71 AGSCSKAEKIFKMLAAYLELDKEKTQQLKTKVNSCFLFEIAAKQQQQPVLQWTIDLRQDG 130
A + K++ I M+ +L D K ++ K+ + IA K+ + + +DL++ G
Sbjct 2 ANTQLKSDAIMDMMKEHLSTDAGK--EVTEKIGLVYQINIAPKKLGFEEVTYIVDLKK-G 58
Query 131 EGCAKAGVWGAADATFAVGEEAFCRICLGELNPQVAFLQGKMKIKGSMAAAAKFTPQLFP 190
E G DATF+ ++ F ++ G++NPQ+AF++G MKIKGS++AA KFTP +FP
Sbjct 59 EVTKGKYEGGKVDATFSFKDDDFVKVATGKMNPQMAFIRGAMKIKGSLSAAQKFTPDIFP 118
Lambda K H
0.315 0.128 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 42433428525
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40