bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2546_orf1 Length=401 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL2215w 739 0.0 > 5833.PFL2215w Length=376 Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/376 (92%), Positives = 367/376 (97%), Gaps = 0/376 (0%) Query 26 MADEEVQALVVDNGSGNVKAGVAGDDAPRAVFPSIVGRPKNPGIMVGMEEKDCYVGDEAQ 85 M +E+VQALVVDNGSGNVKAGVAGDDAPR+VFPSIVGRPKNPGIMVGMEEKD +VGDEAQ Sbjct 1 MGEEDVQALVVDNGSGNVKAGVAGDDAPRSVFPSIVGRPKNPGIMVGMEEKDAFVGDEAQ 60 Query 86 SKRGILSLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRERM 145 +KRGIL+LKYPIEHGIVTNWDDMEKIWHHTFYNELR APEEHPVLLTEAPLNPK NRERM Sbjct 61 TKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPEEHPVLLTEAPLNPKGNRERM 120 Query 146 TQIMFETFNVPAMYVAIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAMMRLD 205 TQIMFE+FNVPAMYVAIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHA+MRLD Sbjct 121 TQIMFESFNVPAMYVAIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLD 180 Query 206 LAGRDLTEYMMTILHERGYGFTTTAEKEIVRDIKEKLCYIALDFDEEMKNAEDSSDIEKS 265 LAGRDLTEY+M ILHERGYGF+T+AEKEIVRDIKEKLCYIAL+FDEEMK +E SSDIEKS Sbjct 181 LAGRDLTEYLMKILHERGYGFSTSAEKEIVRDIKEKLCYIALNFDEEMKTSEQSSDIEKS 240 Query 266 YELPDGNIITVGNERFRCPEALFQPSFLGKEASGIHRTTFDSIMKCDVDIRKDLYGNVVL 325 YELPDGNIITVGNERFRCPEALFQPSFLGKEA+GIH TTF+SI KCDVDIRKDLYGN+VL Sbjct 241 YELPDGNIITVGNERFRCPEALFQPSFLGKEAAGIHTTTFNSIKKCDVDIRKDLYGNIVL 300 Query 326 SGGTTMYEGIGERLTRELTSLAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWITK 385 SGGTTMYEGIGERLTR++T+LAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWITK Sbjct 301 SGGTTMYEGIGERLTRDITTLAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWITK 360 Query 386 EEYDESGPSIVHRKCF 401 EEYDESGPSIVHRKCF Sbjct 361 EEYDESGPSIVHRKCF 376 Lambda K H 0.318 0.136 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 160602117811 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40