bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2580_orf2 Length=339 Score E Sequences producing significant alignments: (Bits) Value 7227.CG2093-PA 124 3e-27 > 7227.CG2093-PA Length=3242 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 18/255 (7%) Query 1 RHLSKILVSVDVLGNPALSLAHLQAGVYALARQPWEAAETG-GDVFEGMIRGAEDFLKHT 59 + L +++ +DVLGNP + L+ GV L +P++ A G G+ EG++ G + HT Sbjct 2906 KQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHT 2965 Query 60 GYGLFGGISRMAGAASDSLGALACDEVYVSNRKKQGRHKARNVEEGLQQGVEALGKALAG 119 G G +S++ GA L AL DE Y R++ ++K +N EGL + + L Sbjct 2966 VGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVD 3025 Query 120 GFTGLVEEPVRGAAEGGFEGLLRGAGRGIAGFLVKPLTGVLDFAQKTAEAIK---DASQV 176 G TG+V +PV GA + G EG +G G+G G + +P GV+DFA + EA+K DAS+ Sbjct 3026 GVTGVVTKPVTGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASED 3085 Query 177 EGRQR-PRFRLPRLLLGNTRLLVAYDSEAAKAKAILAEAEGQYWENLPILFFALDRLLQC 235 R R PRF+ +L L+ EA K + +G+ F D + C Sbjct 3086 VKRMRPPRFQHYDFVLRPYCLM-----EATGNKIMKETDKGK--------FATTDNFIHC 3132 Query 236 LTLVTENHVLLFKYY 250 ++ ++ L+ Y Sbjct 3133 EEIIQKSEYLVVTNY 3147 Lambda K H 0.319 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 124973313570 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40