bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2585_orf1 Length=287 Score E Sequences producing significant alignments: (Bits) Value 393305.YE2684 73.6 7e-12 > 393305.YE2684 Length=904 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/63 (77%), Positives = 49/63 (77%), Gaps = 8/63 (12%) Query 210 EPTPTPEPT--PEPTPTPEP--TPEPTPTPEPTPTPEP--TPEPTPTPEP--TPEPTPTP 261 EPT TPEPT PEPT TPEP TPEPT TPEPT TPEP TPEPT TPEP TPEPT TP Sbjct 812 EPTDTPEPTDTPEPTDTPEPTDTPEPTDTPEPTDTPEPTDTPEPTDTPEPTDTPEPTVTP 871 Query 262 EPT 264 EPT Sbjct 872 EPT 874 Lambda K H 0.308 0.127 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 96012411040 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40