bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2625_orf1 Length=186 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0649 119 3e-26 > 5833.PF14_0649 Length=2558 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 23/187 (12%) Query 4 PSERDGHSTNGLTLQHSPGVILFGGLSGNHFCNDVYILELDFKRWVRKHPAGLPPAPRDQ 63 P ER+GH+T+ ++L + V LFGG + N + ND+Y+L+++ ++W R+ G P PRDQ Sbjct 865 PEEREGHTTHLVSLHNGLSVFLFGGSNENIYYNDIYLLDMETRKWTRRSVKGKIPLPRDQ 924 Query 64 HAASVFPAKTETGNWRDSSSDNLSEFLFVFGGRT--GNPSVSFHCLNDMWALHLPSNTWT 121 H++ V+PAK E NL+E + +FGG+ N VS LNDMW S W Sbjct 925 HSSLVYPAKCEHVR---GEKPNLTEGVIIFGGKCLYNNSIVS---LNDMWIFSFDSILWI 978 Query 122 EVR-VGGTRPPPRYGFSMIWSEDLHLSLFGGE------THGANGRVSCRERVLLEDFWHF 174 + + P R+G +++WS+ + LFGGE TH +ER LL+D W F Sbjct 979 RINYLCDDIPMGRFGMNLVWSDTNTICLFGGEYCEISKTH--------KERTLLDDMWIF 1030 Query 175 KIKDIVN 181 K+ + V+ Sbjct 1031 KVHNNVH 1037 Lambda K H 0.320 0.138 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 40752393066 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40