bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2682_orf3
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0044 189 6e-47
> 5833.PF11_0044
Length=1462
Score = 189 bits (480), Expect = 6e-47, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 134/216 (62%), Gaps = 0/216 (0%)
Query 14 VNSATRVVLEEGAELHHVYSQELDEDSAHFENLSVCCQPRSKYKLTFVDVGAAISRFALQ 73
VN +R+ LEE + + H SQEL + HF N+SV + YK V +G+ SR LQ
Sbjct 1235 VNGFSRICLEEKSNVKHTLSQELGNNVWHFHNVSVKNGLNANYKFVDVLLGSLSSRINLQ 1294
Query 74 VEGSEGSSHVSRGISLLNKDQDHSKFEMLHHIAPDAETDQVHKSLVAGKARAIWRGRIRI 133
+EG +G S G+SLL Q+ S++EM HH P ET+Q+ K LV+ KA A+WR R RI
Sbjct 1295 IEGEKGCKQESYGLSLLEDKQNISQYEMFHHEHPSMETNQLFKCLVSDKAHAVWRSRGRI 1354
Query 134 ERQGTGASASSLNRVILLEDGARCVAVPTLEIVPEDIKKATHGAAIRDFDTEPLFYMMSR 193
ER A ++L + ILL GA V +PTLEI+P DI+ A HGA I D + EP+F +M+R
Sbjct 1355 ERNAIKAKLNTLCKSILLNFGASAVCIPTLEIIPSDIECANHGATISDLEKEPIFSLMTR 1414
Query 194 GLPIDKAKRLLMLAFVDDVVSPVNDEKLAARVRQKV 229
G+ A+ ++M +FV +++ ++DE L RV QKV
Sbjct 1415 GISERNAREIMMNSFVKEILDHISDENLKNRVYQKV 1450
Lambda K H
0.318 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 78050691609
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40