bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2744_orf2 Length=481 Score E Sequences producing significant alignments: (Bits) Value 10090.ENSMUSP00000091641 65.1 5e-09 > 10090.ENSMUSP00000091641 Length=291 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/305 (22%), Positives = 116/305 (38%), Gaps = 92/305 (30%) Query 157 LFVCALWAMAILYLSLPGLTEEARAELESVFPTSFSDLGCLRDIKTLRKLCAAIGVYRQQ 216 +F CA + M ++Y + P L+EE R ++ RD+ + L + Y+ Sbjct 60 IFSCAAFVMFLVYKNFPQLSEEERVNMK-----------VPRDMDDAKALGKVLSKYKDT 108 Query 217 H--PVALALLLSYVYLLYQAFPLFMFPFSGLAMAVTLLLGALYSPLVAFSLASALSAIGP 274 V +A +Y++L A P +F +++L G LY +A L S +G Sbjct 109 FYVQVLVAYFATYIFLQTFAIPGSIF--------LSILSGFLYPFPLALFLVCLCSGLGA 160 Query 275 SLSYFLFKAAGKPLVVRLFPNQLQRMRQLIHPTESSSACGSGCSDISSSSNIASNDKSSS 334 S Y L G+P+V Sbjct 161 SFCYMLSYLVGRPVV--------------------------------------------- 175 Query 335 AAVQLKQKTQTSAEPQGQHQQQREHRQQHLQPRQHRPRCAWDTELDLMLTVLFLRVSPF- 393 K T+ + + Q ++ REH L+ ++FLR++PF Sbjct 176 ----YKYLTEKAVKWSQQVERHREH---------------------LINYIIFLRITPFL 210 Query 394 PNLVINAASPVLDVPFGAFFVATWLGLMPNSALFVSMGSALGSLDSLSSGWRPLAVFVFG 453 PN IN SPV++VP FF+ T+LG+ P S + + G+ L L + +VF+ Sbjct 211 PNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLHQLTTAGEAVSWSSVFILM 270 Query 454 AFAVV 458 A++ Sbjct 271 VLALL 275 Lambda K H 0.327 0.138 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 205093754961 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40