bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2752_orf6
Length=417
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd7_2430 341 2e-92
> 5807.cgd7_2430
Length=460
Score = 341 bits (875), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/427 (43%), Positives = 255/427 (59%), Gaps = 59/427 (13%)
Query 6 VNIPRDREDPNYRYKMPKLLSKIEGRGNGIRTNVYNMGEIARALKRPPMYPTKFFGCELG 65
+NIP +DPNYRYKMPKL+SKIEGRGNGIRT + NM +IAR+LKRPP YPTKFFGCELG
Sbjct 2 LNIPSTVDDPNYRYKMPKLVSKIEGRGNGIRTKIVNMADIARSLKRPPAYPTKFFGCELG 61
Query 66 AMVKFEENEEKALINGAHSEEDLVAILDKFIQMYVLCGGCDLPEIDITVKKGVLVCKCNA 125
A+ K+E+ EEK+++NGAH + DL ++DKFIQMYVLC C+LPEIDI VKK + CKCNA
Sbjct 62 ALSKWEDKEEKSIVNGAHQQNDLQRLMDKFIQMYVLCPNCELPEIDIIVKKERVSCKCNA 121
Query 126 CGYSGTLDNTHKAATYMAKNPPNATETTLGKKKKTKEERRAEKHAKEEDKSEKTGKEKKS 185
CGY G LDN HK TY++KNPP E+T+G K K KE++
Sbjct 122 CGYIGALDNNHKITTYISKNPPGGVESTMGSKNK---------------------KERRE 160
Query 186 KDKDKKKKKGEEENDTDCLNSKAVDHSGDATPTNAGEDSWDEEKSSEADKKEKKKKEKKH 245
+DKD+ + C NS G + D EK S+ K+ KK K
Sbjct 161 RDKDRSSEG--------CNNSN-------------GSTAADNEKPSKHKSKKASKKSSKK 199
Query 246 ANAEGPKLVVKEALTINCPEIAEVAARLRNMIVTSSAVTPDSFFVELRMLQVSQDFDAKC 305
+ E + K+ LT PEI +V RL N + + V+P+ FF ELR+LQVSQDFD
Sbjct 200 SPHE-LDIFEKDVLTFESPEIVDVIERLTNFMQKNEEVSPEDFFSELRVLQVSQDFDEFM 258
Query 306 RMYVVLSALF--KDGLSPELLEEKMAFVAKCCDSSVHASDLLSALENFCFENPHTAMAGY 363
R V+L+ LF KD + P++ + ++ +++K + S+ ++ ++S E++C E + +A Y
Sbjct 259 RFSVLLAVLFGLKDPIDPKVFKLRIPYISKAVEGSLRSNAIISIFESYCVEKNPSTLATY 318
Query 364 PYMLQRLYNAELLEPEDILAYYNSPRADAATQKCRT---------FAEPFLKWLA----- 409
PY++Q+LY+A++L + IL YY + C T EPF+ WL
Sbjct 319 PYLIQQLYDADILSEKVILKYYQKDAPTSWVSGCSTQDTFEKAKKSCEPFVDWLLDGSND 378
Query 410 EADSSDE 416
E+D SDE
Sbjct 379 ESDLSDE 385
Lambda K H
0.313 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 168781316990
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40