bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2775_orf2 Length=319 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1790w 122 1e-26 > 5833.PFL1790w Length=686 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 120/237 (50%), Gaps = 38/237 (16%) Query 108 SPHKIWSVEECQKIFLRTFCALMERKQRLLQQQQQQQQQQQQQQQQGIPFDKDDDLAMDF 167 S IW ++C +++++TF L + +++++ + FDKDDD ++F Sbjct 318 SSQNIWDKKKCIEMYIKTFLKLY------------KYLNINKKEEEYLIFDKDDDECINF 365 Query 168 VAAASIIRMNTFHIPPKNRWELQAIVGAIIPAIASTNAIVAAMQVVEAMHLLSFME---- 223 + + S IRM F I K+++++Q+I G IIPAI+STNAIVA++Q + +H++ + E Sbjct 366 ITSISNIRMLNFCISQKSKFDIQSIAGNIIPAISSTNAIVASLQAFQLIHVIEYFETLKN 425 Query 224 ----------------------QQKLQKEQQQQQQQPEKTVRDSLARQVWVKPFVTGRRS 261 + + +++ + +R+S A+ VWVK V G + Sbjct 426 KNNKKNNNNNKKNNNNNNNNNNENNVSYCDEEENKTDHFNIRNSKAKHVWVKSIVNGNKI 485 Query 262 EEFGLLLLPEALEAPRSSCFVCQQITVTVKLASLKQWSLLAFLTKVLQNGLGCKHAF 318 G L+ E LE P +C++CQQ T+ + + + ++ +L F+ + N L + F Sbjct 486 FSRGNLVNAEPLEIPNPNCYICQQPTIHIYIKNFEKMTLYNFVKDICMNELSFLYPF 542 Lambda K H 0.318 0.129 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 114140509963 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40