bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2789_orf3 Length=336 Score E Sequences producing significant alignments: (Bits) Value 13616.ENSMODP00000005874 171 4e-41 > 13616.ENSMODP00000005874 Length=313 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 150/317 (47%), Gaps = 37/317 (11%) Query 19 KVQNTSFTLPGAEDQLTWSSPFTFALIADPQFGLYR---------NNNSWEEERQQVAEC 69 + +N + + E +L W SPF F ADPQFGL + + WEEE + + Sbjct 12 RARNRTLDVFPEEKELQWKSPFYFVQGADPQFGLMKAWSVGDCENGGDEWEEEMKLTQQA 71 Query 70 IIAAASLSSKPAFIAILGDLVHAPVPALSQESLQDEVRAVRDQQAKDLKDVIDKPSKDVP 129 + A LS KP F + GDL+HA +P R Q KDLK+++ K++P Sbjct 72 VQAINKLSPKPKFFVLCGDLIHA-MPGTQW----------RSNQIKDLKEILKAVDKEIP 120 Query 130 VLVLPGNHDVGNAPTAASIADYEQLWGKDHFSFWFGGVKFVAANSSVLYDDTNAKELAEE 189 ++ + GNHD+GN PT+ +IA+Y Q WG D+FSFW GGV F+ NS + D + L + Sbjct 121 LVFVSGNHDLGNVPTSETIAEYCQTWGDDYFSFWVGGVLFLVLNSQLYADSSKCLNLKQA 180 Query 190 QFEWIENELKDGMEKGAKQQFLLQHHQFYWDNWGEADDKTNTVEVRQMRAHNPVSLFQLP 249 Q +W++ +L +K K + QH + N E DD F L Sbjct 181 QDQWLDTQLAIAKQKMCKHAIVFQHIPLFLKNVSEEDD-----------------YFNLS 223 Query 250 KRWRERFQPLMKKYNVAASFHGHLHYDSLLQDGDTPQIVTSSCGFATNDGRPGWRLVTVE 309 K R+ K + A F GH H ++ D +V+S+ G + G R+V V Sbjct 224 KPVRQELVDKFTKAGIKAVFSGHYHRNAGGLCKDLDMVVSSAIGCQLGEDTHGLRVVVVT 283 Query 310 ESKFSHEFYPVKWLTSD 326 K H +Y + L+++ Sbjct 284 AEKIVHRYYSLNKLSNE 300 Lambda K H 0.318 0.133 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 124299612944 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40