bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2847_orf1 Length=311 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI1320c 102 2e-20 > 5833.PFI1320c Length=225 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 34/216 (15%) Query 13 MGGDGGSFSGRAEMVRTKGFKFLRNLGGMGYTPNTQIRAADERFGKNENRDIRTRACAYS 72 MGGDGGS R ++VR K K N G +GY NT + ++ K E R+ C S Sbjct 1 MGGDGGSLPQRVDLVRMKNKKLRENTGSLGYEKNTLVNVNQNKYNKKELREYHFNRCVIS 60 Query 73 AEKLKPPLLACRIGRLYNKEAVIKALLEKTLP---------PHMRHIKSLKDMKDCDVEI 123 E LK P CR+G LYNKE + LL K H+ SLKD+ C ++ Sbjct 61 EELLKEPFFCCRLGYLYNKEHAFQLLLVKKQNKKKRKKDTFEKFAHVDSLKDLVLCKNKL 120 Query 124 NAETGFPVCAVTKADLSSGVRGCIIWPCGHVVSNRALDAMTQKDGEGSRPDVGNNQSGKP 183 N E G +C ++K ++S G ++ CG V S + + R ++ ++ Sbjct 121 NEE-GKLICLISKEIINSTSGGICLFSCGCVFSKKVFN----------RVNISEDK---- 165 Query 184 KIRGVFTCPMCSKEHNAEEDLIPLSPDEEETVALLE 219 C C+K++ E D+I + E VALLE Sbjct 166 ------MCITCNKQY-KESDIIEIGV---EDVALLE 191 Lambda K H 0.313 0.131 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 109359755619 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40