bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2872_orf1
Length=206
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF1335c 131 1e-29
> 5833.PFF1335c
Length=189
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Query 57 KTALVVLANGAEDVEFVAAVDVLRRAGMKVLVASVGDSLFVKTSHGLKIEGDILLKEVSE 116
KTALV +A+G+EDVE++ VDVLRRAG+ V ASV S V + D + +V
Sbjct 5 KTALVAVASGSEDVEYITVVDVLRRAGVHVTTASVEKSEQVCLQSKNVVLADTTISKV-R 63
Query 117 QNNYDVIVIPGGLKGAENCRDSSHLAALLRAQHSSSKWIAAICASPALVLQQQGFLENVR 176
N YDV+VIPGG+KG+ + S +L+ Q ++++ AAICA+P VL + +++V
Sbjct 64 NNIYDVLVIPGGMKGSNTISECSEFIDMLKEQKANNRLYAAICAAPETVLDRHSLIDDVE 123
Query 177 AVAYPSFQQQLPLKGEGRVCVDKHFITSVG 206
AVAYPSF++ G+GRVCV K+ ITSVG
Sbjct 124 AVAYPSFERNFKHIGKGRVCVSKNCITSVG 153
Lambda K H
0.316 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 51449491716
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40