bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2879_orf1 Length=152 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_3710 165 4e-40 > 5807.cgd1_3710 Length=695 Score = 165 bits (417), Expect = 4e-40, Method: Composition-based stats. Identities = 74/141 (52%), Positives = 102/141 (72%), Gaps = 0/141 (0%) Query 12 VCRFANLLKSLDVRKGDIVTIYLPMMPEIVYAMLACARIGAVHSVVFAGFSANSLAERLE 71 VC+ AN+LK ++KGD V IY+PM+PE +Y MLACARIGAVH VVFAGF+A +L ERL Sbjct 155 VCKMANVLKRFGIKKGDSVGIYMPMIPETIYTMLACARIGAVHMVVFAGFAAQNLLERLV 214 Query 72 DAHSRVLITATKGMRGGRVVRLKQVVDEALKLCSCVQHVVLFRKSAEPSSFVEGRDLSGD 131 +A ++++TA +G RG +++ LK VVD+AL+ ++ ++FR P FV+GRD G+ Sbjct 215 NARCKIVVTADQGSRGKKIINLKDVVDKALEKIPEIKTCIVFRHLNGPIEFVKGRDFDGE 274 Query 132 DLLPQMRPYCPLETMDSEDML 152 L+ +PYCPLE MDSED L Sbjct 275 TLMRSEKPYCPLEDMDSEDPL 295 Lambda K H 0.326 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22586169780 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40