bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2886_orf1 Length=318 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0098 159 1e-37 > 5833.PF11_0098 Length=343 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 11/257 (4%) Query 45 KLSGEKLAELMQLSLSEIKDRMETIFSFIDTNGDGVITTEEAQQWSTRLKDAMHKHQVRQ 104 KL+ +++ +++ L + K+R+E +F ID N D IT EE WS+ LK+ + QV+ Sbjct 43 KLNDDQVKDILGLKIDGAKERIEKLFHLIDKNNDKEITEEELNTWSSFLKNEIFLKQVQA 102 Query 105 EFISIDKDGDGKITLEELEVTYTDGADAANQEAHKEEVQKRFAAVDKDKSGSLSLEEVTV 164 E ID D DG I+L EL + DA E H E + KRF VDKDK G LS+ EV + Sbjct 103 EMGQIDSDKDGFISLNELNDAFAQNLDAKEVEKHSEGLLKRFQIVDKDKDGKLSINEVGL 162 Query 165 LMDPGKDATLMQIEVDEIMAAQDKDKDGNISLDEF--LLNEGGTLTDPEREELTREFSTY 222 L+DP KD L ++E++EI+ D +KDG ISLDEF ++ + + E +F+ + Sbjct 163 LIDPMKDEELKELEINEILEHHDVNKDGKISLDEFKQTRSDESSGVKKDDEMALDDFNFF 222 Query 223 DKNGDGKIDEAELRAVIEDPHAH-----DLQQMMESLAAEMEDGKITKDQWTDKFETFSV 277 D N DG ID+ E+ V DP AH ++ ++ E++ E KIT D W +K +V Sbjct 223 DANKDGFIDKEEIIKVYFDP-AHESGAINVNEIKENI---FEGKKITYDLWNEKALKIAV 278 Query 278 SMLTDNGELLRFPEEYE 294 + LTD G+++R+PE+++ Sbjct 279 TSLTDYGDVIRYPEDFK 295 Lambda K H 0.311 0.130 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 113542915670 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40