bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2886_orf1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0098 159 1e-37
> 5833.PF11_0098
Length=343
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 11/257 (4%)
Query 45 KLSGEKLAELMQLSLSEIKDRMETIFSFIDTNGDGVITTEEAQQWSTRLKDAMHKHQVRQ 104
KL+ +++ +++ L + K+R+E +F ID N D IT EE WS+ LK+ + QV+
Sbjct 43 KLNDDQVKDILGLKIDGAKERIEKLFHLIDKNNDKEITEEELNTWSSFLKNEIFLKQVQA 102
Query 105 EFISIDKDGDGKITLEELEVTYTDGADAANQEAHKEEVQKRFAAVDKDKSGSLSLEEVTV 164
E ID D DG I+L EL + DA E H E + KRF VDKDK G LS+ EV +
Sbjct 103 EMGQIDSDKDGFISLNELNDAFAQNLDAKEVEKHSEGLLKRFQIVDKDKDGKLSINEVGL 162
Query 165 LMDPGKDATLMQIEVDEIMAAQDKDKDGNISLDEF--LLNEGGTLTDPEREELTREFSTY 222
L+DP KD L ++E++EI+ D +KDG ISLDEF ++ + + E +F+ +
Sbjct 163 LIDPMKDEELKELEINEILEHHDVNKDGKISLDEFKQTRSDESSGVKKDDEMALDDFNFF 222
Query 223 DKNGDGKIDEAELRAVIEDPHAH-----DLQQMMESLAAEMEDGKITKDQWTDKFETFSV 277
D N DG ID+ E+ V DP AH ++ ++ E++ E KIT D W +K +V
Sbjct 223 DANKDGFIDKEEIIKVYFDP-AHESGAINVNEIKENI---FEGKKITYDLWNEKALKIAV 278
Query 278 SMLTDNGELLRFPEEYE 294
+ LTD G+++R+PE+++
Sbjct 279 TSLTDYGDVIRYPEDFK 295
Lambda K H
0.311 0.130 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 113542915670
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40