bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2928_orf2 Length=133 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL8P1.65 158 4e-38 > 5833.MAL8P1.65 Length=1235 Score = 158 bits (400), Expect = 4e-38, Method: Composition-based stats. Identities = 70/108 (64%), Positives = 88/108 (81%), Gaps = 0/108 (0%) Query 2 QRLVDGFNQTEECTAFLLSTKAGGQGLNLTAARTVILLDQDWNPQNDRQAEDRVHRLGQT 61 Q+++ F++ E FLLSTKAGG GLNL AA VIL+DQDWNP NDRQAEDRVHRLGQ Sbjct 1096 QKIIKRFSKDENIFVFLLSTKAGGVGLNLIAANHVILMDQDWNPHNDRQAEDRVHRLGQK 1155 Query 62 HEVTVYRLCCRGTVEESILKCCQRKLDLDSAFGGNSEVLQAAILRDSL 109 +EV +YRLCC+ T+EE+ILKC + KL LD AFGGN+E+LQ A+++D+L Sbjct 1156 NEVFIYRLCCKNTIEEAILKCNKAKLHLDQAFGGNNELLQTALIKDAL 1203 Lambda K H 0.316 0.134 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22766716098 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40