bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2936_orf2
Length=85
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI1695c 90.1 2e-17
> 5833.PFI1695c
Length=193
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query 4 SKGALEARA----SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAA 59
SK +E ++ +L V+NL + +K ALEILF+QY GF EVR + G+ +AFVDF A
Sbjct 109 SKHNIEHKSNLIYTLLVQNLPDEINKNALEILFNQYPGFYEVRYIPGKNIAFVDFTAQEH 168
Query 60 AEVALSGLQGFKISSSHQLRISHV 83
AE++++GLQ FKI+ H ++IS V
Sbjct 169 AEISMTGLQNFKITPHHPMKISWV 192
Lambda K H
0.317 0.133 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22515314785
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40