bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2939_orf3
Length=407
Score E
Sequences producing significant alignments: (Bits) Value
69293.ENSGACP00000013321 256 7e-67
> 69293.ENSGACP00000013321
Length=504
Score = 256 bits (655), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 200/318 (62%), Gaps = 4/318 (1%)
Query 33 GHVLCCICGAVTPPHPRNKCLSCLQDEIDLSSRVCRTFVVDRCRQCGRFKDSQGKWLSCE 92
G++LCC CG PP+P N C++CL+ ++D+S + + V+ C+QC R+ W+ C
Sbjct 13 GNILCCTCGVPIPPNPANMCVACLRTQVDISEGIPKQVTVNFCKQCERYLQPPATWMQCA 72
Query 93 LESRELLALCLKRIRGLKSLSRISDCRWLYSEPHSNKLLLRLTARADVLEGKAEVEQSFN 152
LESRELLALCLK+I+ + R+ D +L++EPHS ++ ++LT + +V+ G A ++Q F
Sbjct 73 LESRELLALCLKKIKSSMTKVRLIDAGFLWTEPHSKRIKMKLTIQKEVMNG-AILQQVFV 131
Query 153 VSGLVHNMQCDECKQAFTPHAGWGARVQVRQRCDHKRTFLFLEQLLLQQQHLLQKLLRVV 212
V ++ CD+C + W A VQVRQ+ HK+TF +LEQL+L+ + L Q L +
Sbjct 132 VEYVIQYQMCDDCHRV-EAKDFWKAVVQVRQKTVHKKTFYYLEQLILKHK-LHQNALNIK 189
Query 213 QRRDGLDFYFPNKQAAASFVSFCSSRLPCSSRSSKQLISHDCNSNTYFYKHTVYVELPAI 272
+ DG+DFY+ +KQ A V F +PC S++S++LISHD +SNT+ YK T +E+ +
Sbjct 190 EVNDGIDFYYASKQHAMKMVDFLQCTVPCRSKTSQRLISHDIHSNTFNYKSTFSLEIVPV 249
Query 273 CRDDLVYIPAKKAQDSFGGFPSLSLCTRVSSTLHLTDPFSGRHLDMAADVYFRDTFKPIC 332
C+D++V + + AQ S G + +C RV+ST+HL DP + + ++ + Y+R+ F +C
Sbjct 250 CKDNVVCLSPRLAQ-SLGNMGQVCVCVRVTSTIHLIDPNTLQIAEVDGNTYWRNPFYSLC 308
Query 333 TRKHLSHFLIVAVTPLQQ 350
R+ L F+++ L+
Sbjct 309 NRRQLEEFIVMDTDTLRN 326
Lambda K H
0.324 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 164157884257
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40