bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2966_orf2 Length=159 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL2325c 111 8e-24 > 5833.PFL2325c Length=289 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%) Query 4 ITDHISVQIRHAFVRKVLGILAVQILFTFGIASVFGFVPTLRTFLLQNYW-LAIVAAVCG 62 + + S +IRH F+RKV IL++Q+L TFG A++ F+L Y L IV + Sbjct 65 LNEFSSTKIRHGFIRKVYSILSLQLLLTFGCAALAVLYKPFNAFVLTYYSPLFIVGVLLS 124 Query 63 LVLQLVLVCVPDLARKVPVNFILMTLITACYAVLTSCAAAASSWESFLIAIGSTFVVVVG 122 L + + L C P +ARK P N+ ++ IT +++ + A+A ++ E F A G+T VVV+G Sbjct 125 LPIMIALACAPHMARKYPSNYFILLSITLGMSLIVTLASARTNSEIFFYAFGTTAVVVIG 184 Query 123 LMLFACQTKYDFTGCGTYLFVAVLCLMIFGILSIF 157 L +FA QTK+DFTG +LF+A L L++ GI+ IF Sbjct 185 LTIFAFQTKWDFTGWYVFLFMAFLILIVMGIIGIF 219 Lambda K H 0.337 0.146 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26246233818 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40