bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3007_orf1 Length=280 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0571 176 8e-43 > 5833.PF14_0571 Length=334 Score = 176 bits (446), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 82/228 (35%), Positives = 145/228 (63%), Gaps = 2/228 (0%) Query 46 SLLDFSPLSNLQKKHLAKIYAALTSNVLATALGVYVHLNCFALPNFLALLLSLACVLALS 105 ++++FSPL+N ++ HL KIY L + +AL YV + F +P F+A ++SL C L+ Sbjct 109 NIMNFSPLTNEERNHLIKIYGLLAMGTIVSALSCYVDIYYFKVPRFIASIISLVCSFLLA 168 Query 106 FSSQKAHAESKMLTGERALYFGGFGFLNGMLAGNYLAAVHFYVGPQVVPAAFLASVAIFC 165 SS +H + + +R +YF G G+L +Y+ V+ Y+ P ++P AF S++IFC Sbjct 169 -SSCNSHYQLVDTSKKRLVYFAGISSSIGVLISDYINYVN-YLNPSILPLAFFGSLSIFC 226 Query 166 CLSAAALVAKQRSYLYLGSILGAAITYLSLASLANIFLRLQLLNDVLLWGGLFMYLGFVV 225 C S AA+ +K R ++LG++L A +Y++L S N F+R + ++ LL+ G FMY+GFV+ Sbjct 227 CFSLAAIFSKNRISIFLGAVLCAVCSYMALISFMNFFIRSKFIDTTLLYTGFFMYMGFVL 286 Query 226 YDTQLAVAQFDAGNRDYLLQAVQFYINFISIFLRLVAILSERQEETNR 273 +DTQ+ + F GN+DY++ ++ Y++ + +F L+ IL +++E+ + Sbjct 287 FDTQITLFDFRRGNKDYIMHSICLYLDLVGLFTHLLRILGQKEEKKKK 334 Lambda K H 0.328 0.139 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 92794370130 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40