bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3065_orf1 Length=343 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0072 179 9e-44 > 5833.PF10_0072 Length=646 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 29/311 (9%) Query 2 PGKKLVIRDLTFVVWATDPDNGPGFVRKDTAMYISVDPWGEYRRVHILPFADTLPTTYSF 61 GK +I + TF+ D D GF+ K+T + +SVD + +Y+ VHI+P DTLPTTY++ Sbjct 359 SGKLFLINNFTFLTLKIDSDVNVGFIDKNTEIILSVDTYEQYKNVHIVPMYDTLPTTYNY 418 Query 62 RLFEDYLQPFLKEQPWRLIRKGDIFTFRGVEFKVIATEPSTIPV--ARVGPETVVHFEGS 119 LF DY++P+++ + D F ++GV+FK++ +P I R+ T ++ EG Sbjct 419 DLFMDYVKPYIERHYLNVYSIHDTFFYKGVQFKIMGIDPVNIKYGKGRISCNTFIYTEGC 478 Query 120 LNPSLIDILPPDILSRVRRLPARVQPFAIVAAAQSLDPQLLLRVLPSG--NMRGNPRGID 177 + P+ D++ + ++ +R LP +P+AI+ Q LD LLR+ PS N+R N + + Sbjct 479 IKPTFFDVISKESINYIRSLPFEYKPYAILNILQHLDSDSLLRLFPSSNINIRENHKKEE 538 Query 178 EGLEAAVERQLVGPFCLSAYQRLYAHLCTRKKRHPSREKREEAEANGEADAPGCSQEIPS 237 + LE + + + K + ++ E ++ + + +++ Sbjct 539 KLLEQLTKHKYI--------------FNKNFKNNYTKNSLENNDSKNKENYHHINRKREL 584 Query 238 SRSSTAEAEAAVAEAAAGGWELEAPCCTVCTLQLQDGAESVTLTCGHAFHWDCARAWLRC 297 +++ + E C VC QD + + LTC H +HW C + W + Sbjct 585 HTTTSTLKSNLINEQ-----------CAVCFEYFQDYDKCIKLTCLHTYHWKCVKNWFKF 633 Query 298 SATCPNCRAEV 308 + TCP CR ++ Sbjct 634 NLTCPCCRYKL 644 Lambda K H 0.321 0.136 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127353757638 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40