bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3108_orf1 Length=437 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_2560 245 2e-63 > 5807.cgd1_2560 Length=309 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/308 (39%), Positives = 189/308 (61%), Gaps = 16/308 (5%) Query 122 KPQPTQPIPFEHFSREWMNISGQDTFDGFRLEGAKQVNKYLQTCHSFCLGTQLRESGYSY 181 + + + +E+FS E +I +++FDGFR E AK V LQT +S LGT GYSY Sbjct 12 NERTNKSLQYENFSLESQSIFQRESFDGFRAEIAKSVTSNLQTSYSLFLGTS-NIKGYSY 70 Query 182 QFGPTVAISPPPDPSQGENAQPPPPHFFAMAKLGTDGSLQGRLIKTLCQSADLKLNFNSS 241 Q GP+ Q + +A++ +G++ GR + + + +++ NSS Sbjct 71 QLGPSY--------------QSSSKNTLILARVNDEGTVSGRFSRCFGNNIEGRISINSS 116 Query 242 LKDEQRNFYEISLDNTGRDWASSLKVAWQSCWILDGMFSQVLTPRLQAGCEITYVGANGA 301 L DE +N E+S+D G + + SLKVA+Q ++L+G+FSQ++T +LQ G E+T++ AN Sbjct 117 LSDENKNMSEVSIDYNGEESSYSLKVAYQGIFLLNGLFSQLITNKLQLGGELTWIAANNT 176 Query 302 SMLAVGGRYNLDKQSVVSCQLSQQPDFKSPAGLTKLTHTCKVQYARKVTDRLSMASEFEY 361 S++++G RY +++ Q+++QPDF SP + H+ + + RK++DRLS+ASE E Sbjct 177 SIMSLGSRY-CHGKNIFFNQITRQPDFTSPGRIFANIHSLRSSFYRKLSDRLSLASELEV 235 Query 362 SHPETESALRVGWEYLFRQARVQGLIDSCGRISVFAQDYNGFGVSGLIDYWRGTYKFGFL 421 S P ES LR G+EYLF+ AR+QG+ID+CG+IS+ D GFG+S IDY R YKFGF+ Sbjct 236 SIPNFESTLRFGYEYLFKTARIQGMIDTCGKISLQCLDNKGFGISAAIDYLRNDYKFGFM 295 Query 422 MHVVPPPE 429 M P + Sbjct 296 MQFFPNEK 303 Lambda K H 0.317 0.134 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 180584206290 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40