bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3137_orf1 Length=180 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_4330 103 2e-21 > 5807.cgd2_4330 Length=137 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 6/134 (4%) Query 48 FCLRLFSCSGIYVALQNFKEGISVKANDAIRQASTFHGLSEIAAQLSPLSCFSSSDSSSI 107 + L + + +G + ++F + I + AND IR ASTFHGL IA Q+SP+ D I Sbjct 1 YSLYINNKNGSLIYQRDFSD-IPLTANDRIRLASTFHGLCTIARQISPIKTKRLDDY--I 57 Query 108 QP-RGICLIETPQFNVQCLETLTGLRFVLVADPTLSRQSVEQCLRRVYVAYADYGLKNPF 166 Q GI I T F ++C ETLTGLRF L+A + Q + + L +VY Y DY LKNPF Sbjct 58 QTSNGISSISTELFRLECFETLTGLRFFLIA--SKDAQGLNELLHKVYQGYTDYVLKNPF 115 Query 167 YDIDMPLRCPLFEQ 180 +D+DMP+R LF++ Sbjct 116 HDLDMPIRSILFDK 129 Lambda K H 0.328 0.138 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 37047630060 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40