bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3141_orf1 Length=120 Score E Sequences producing significant alignments: (Bits) Value 7955.ENSDARP00000041248 77.8 1e-13 > 7955.ENSDARP00000041248 Length=190 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 0/67 (0%) Query 53 CRRPGCGQAFDPSSNKEDSCRHHKLMPVFHDGVKQWPCCGQEAWDWDAFMKLQGCAVGPH 112 C GCGQ FDP +N +DSC HH +PVFHD +K W CC + D+ F+ + GC GPH Sbjct 5 CYNKGCGQRFDPENNPDDSCTHHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGPH 64 Query 113 SEEAPQQ 119 ++E P + Sbjct 65 NKEKPLE 71 Lambda K H 0.327 0.135 0.532 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23080484097 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40