bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3175_orf2 Length=92 Score E Sequences producing significant alignments: (Bits) Value 10116.ENSRNOP00000044484 70.9 1e-11 > 10116.ENSRNOP00000044484 Length=207 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 2/76 (2%) Query 14 KDPGAPKRPLSAYMLFVRDKRQQVLQQQPELKSNVKEVARVLGEMWRSAAAAEKQQFAAA 73 KDP APKRP SA+ LF + R +V + P L ++ +VA+ LGEMW S AA +KQ + Sbjct 82 KDPSAPKRPQSAFFLFCSEYRPKVKGEHPGL--SIGDVAKKLGEMWNSTAADDKQPYGKM 139 Query 74 AAKEKAKYAAALAAYK 89 AAK K KY +AAY+ Sbjct 140 AAKLKEKYEKDIAAYR 155 Lambda K H 0.312 0.120 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22844715270 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40