bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3193_orf1 Length=328 Score E Sequences producing significant alignments: (Bits) Value 4952.YALI0E14399g 93.2 1e-17 > 4952.YALI0E14399g Length=814 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 47/313 (15%) Query 18 SGTRWQTHLLPQPSHEPHATQELLALVTALDKWSHLLRVSTVTAYTDHQALTHLQRLQAS 77 T+++ H + P+ E +E A++ AL KW H L TDHQ+L++ + Sbjct 207 ESTKFKKHEMNYPTRE----KEFYAIIHALRKWRHYLLGRPFLIETDHQSLSYFT--SQT 260 Query 78 KPLRGRTARWLDILAKFPGFHITYVQRTRNQVADAL--------------SCRLGLPNAG 123 P GR +RWLD LA++ F I YV N AD L L + G Sbjct 261 HPPSGRLSRWLDFLAEY-DFEIKYVPGKDNDAADGLSRMLAQTAMVFEPDDSLLDIIKQG 319 Query 124 IRSRRPRR---RSLSSAPSPSLPEPNPEAEHPTLTTMTP--------ADPPDVRQWPQAY 172 S + + L++ P E + A H T + P+ Sbjct 320 YESDEYFKDVFKVLATEPVVIPKEMHNHARHFRYDKNTGLLYFASVYKGEGERLCVPRGK 379 Query 173 SKCPVFRVPHKA-AANQPGEALQIEFCNRQFTF-RYVEPYLHIRVHGLWRICVPFPEFLS 230 ++ + + H A A G E R + + R ++ H+R H R C+ Sbjct 380 ARKMLMKEAHDAPLAGHYGYFKSYERLARAYYWPRMID---HMRNHT--RSCL------- 427 Query 231 QVCRASKSLNQKPAGLLQQLLIPSCRWAHVGLDFITDLPLTTTGHDSIFVMVDSLSKMAH 290 +C+ +K+ P GLL+QL +P+ W + +DFI +P T GH++I+V VD +SKM H Sbjct 428 -ICQTTKARRAPPQGLLKQLPVPTGNWQEITMDFIGGIPTTHRGHNNIWVTVDRMSKMVH 486 Query 291 FVPTSNLTNASGI 303 +P T+ + Sbjct 487 LIPCKTSTDGEEL 499 Lambda K H 0.322 0.134 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 119518858600 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40