bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3204_orf1 Length=348 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0598 514 2e-144 > 5833.PF14_0598 Length=337 Score = 514 bits (1324), Expect = 2e-144, Method: Compositional matrix adjust. Identities = 240/334 (71%), Positives = 282/334 (84%), Gaps = 0/334 (0%) Query 11 VCRMGINGFGRIGRLVFRAAMANPNVEVVALNDPFMDVQYMAYQLKFDSVHGRYPGEVTV 70 V ++GINGFGRIGRLVFRAA ++EVVA+NDPFMD+ ++ Y LK+DSVHG++P EVT Sbjct 3 VTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTH 62 Query 71 KDGNLVVEGKTIQVFAEKDPAAIPWGKVGAHYICESTGVFTNKEKAGLHVSGGARKVIIS 130 DG L++ K + VFAEKDP+ IPWGK +CESTGVF KE A H+ GGA+KVI+S Sbjct 63 ADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 122 Query 131 APPKDDTPMFVMGVNHEEYTSSHQVVSNASCTTNCLAPLAKVVHEKFGIVEGLMTTVHAM 190 APPKDDTP++VMG+NH +Y + +VSNASCTTNCLAPLAKV++++FGIVEGLMTTVHA Sbjct 123 APPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAS 182 Query 191 TANQLTVDGPSKGGKDWRAGRCAGSNIIPASTGAAKAVGKVIPSLNGKLTGMAFRVPVPD 250 TANQL VDGPSKGGKDWRAGRCA SNIIPASTGAAKAVGKV+P LNGKLTG+AFRVP+ Sbjct 183 TANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGT 242 Query 251 VSVVDLTCRLAKPAKYEDIVAAIRAAAEGPLKGILGVTEDEVVSQDFCGDKRSSIFDVKA 310 VSVVDL CRL KPAKYE++ I+ AAEGPLKGILG TEDEVVSQDF D RSSIFD+KA Sbjct 243 VSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKA 302 Query 311 GIQLNDNFVKLVSWYDNEWGYSNRLVDLAVYMSQ 344 G+ LNDNF KLVSWYDNEWGYSNR++DLAV+++ Sbjct 303 GLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336 Lambda K H 0.318 0.135 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130329312723 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40