bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3253_orf1
Length=281
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI0920c 249 8e-65
> 5833.PFI0920c
Length=577
Score = 249 bits (636), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 179/264 (67%), Gaps = 18/264 (6%)
Query 25 VCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRD 84
VC+ GG + +++EAA E AGYDE+N+NVGCPS +V +KG+FGA+LM++P +VR+
Sbjct 257 VCQL---GGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGASLMKNPEQVRN 313
Query 85 IVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK 144
IVYE+K++VQIPVTVK R GVDN DS +F K F+ETVS GC HFIVHARKAWL+G+DPK
Sbjct 314 IVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHARKAWLKGLDPK 373
Query 145 KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKG---EWKAGDTAEAKDP- 200
+NR +PPL Y++V++L + +P L F+LNGG+ T++ A LL G E + D
Sbjct 374 QNRKIPPLEYYKVYDLCKLYPHLKFTLNGGIQTIQEAIALLNGYMPENYNNNNNNNNDTS 433
Query 201 ---QIPDADVTNGSQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPESAQCRRSLLL 257
QI + ++ + L G+MIGRA M + L+Q DKL+Y +++ P +A RR++L
Sbjct 434 NFIQIDNYNI------NPLNGIMIGRACMENITVLSQTDKLVY-NQDIPSTAYSRRTILE 486
Query 258 AYIDYLERYEARHRKQKSPFVLLK 281
AY YLE+ + S F LLK
Sbjct 487 AYKKYLEK-NSLFYNLSSSFELLK 509
Lambda K H
0.320 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 93396930975
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40