bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3347_orf2 Length=114 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P3.8 141 6e-33 > 5833.MAL3P3.8 Length=532 Score = 141 bits (355), Expect = 6e-33, Method: Composition-based stats. Identities = 64/112 (57%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Query 3 MSLVCAVTGEVPDEAVFCPKTNLIYEKRLIMKHIAATGCCPVSGAQLQQQDLLPIKTNPT 62 MS++C ++G+ P+E V KT I+EKRLI KHI G CPVSG L +DL PIK Sbjct 1 MSIICTISGQTPEEPVI-SKTGYIFEKRLIEKHIINYGICPVSGEVLTLEDLYPIKNEKI 59 Query 63 VKPRPLSASSIPGLLSCLQTEWDSLMSEAFLLKTHLEQVRKQLAHALYQQDA 114 VKPRP++ASSIPGLLS QTEWDS++SE F L+TH+ +R +L+H+LYQ DA Sbjct 60 VKPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDA 111 Lambda K H 0.319 0.131 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22778399648 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40