bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3350_orf4 Length=326 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_950 577 3e-163 > 5807.cgd7_950 Length=473 Score = 577 bits (1486), Expect = 3e-163, Method: Compositional matrix adjust. Identities = 274/326 (84%), Positives = 306/326 (93%), Gaps = 0/326 (0%) Query 1 AGSALLIILQLFFAGVVVIILDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTIKTG 60 A +A+LII+QLFFAGVVVI+LDEL+QKGYGLGSGISLFIATNICETIVWKAFSPTTI TG Sbjct 148 AWNAILIIIQLFFAGVVVILLDELMQKGYGLGSGISLFIATNICETIVWKAFSPTTINTG 207 Query 61 KGTEFEGALVALFHCLFTKSSNLAALKEAFYRSNAPNITSLLATVLVFLIVIYFQGFRVD 120 +GTEFEGA++ALFH LFTK ++AL+EAFYRS+A N+T+LLATVLVFLIVIYFQGFRVD Sbjct 208 RGTEFEGAVIALFHLLFTKPDKISALREAFYRSHATNMTNLLATVLVFLIVIYFQGFRVD 267 Query 121 LAVKYQRVRGQQGSYPIKLFYTSNIPIILQTALVSNLYFLSQLLYRRFKHNVLVNLLGQW 180 LAVKYQ+VRGQQGS+PIKLFYTSNIPIILQTALVSNLYF SQLLYRRFK N+LVN+LGQW Sbjct 268 LAVKYQKVRGQQGSFPIKLFYTSNIPIILQTALVSNLYFFSQLLYRRFKSNMLVNILGQW 327 Query 181 QEVDAGGHSVPVGGIAYYISPPGSFGSILEDPVHSFVYITFVLVSCALFSKTWIEVSGSS 240 QE+D GG S+PVGGIAYYISPP S ++ DP+H+F YI+FVL+SCALFSKTWIEVSGSS Sbjct 328 QELDVGGQSIPVGGIAYYISPPNSLVDVVSDPIHTFFYISFVLISCALFSKTWIEVSGSS 387 Query 241 SRDVAKQLRDQQMVMKGYRDSSLVQVLNRYIPTAAAFGGMCIGALTIIADFLGAIGSGTG 300 ++DVAKQLRDQQM+MKGYRDSSLVQVLNRYIPTAAAFGGMCIGALTIIADFLGAIGSGTG Sbjct 388 AKDVAKQLRDQQMIMKGYRDSSLVQVLNRYIPTAAAFGGMCIGALTIIADFLGAIGSGTG 447 Query 301 ILLAVTIIYQYYEMLAKEKEQGNSIF 326 ILLAVTII+QYYEM AKE+E GN +F Sbjct 448 ILLAVTIIFQYYEMFAKERESGNIVF 473 Lambda K H 0.325 0.141 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 118323670014 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40