bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3361_orf1 Length=258 Score E Sequences producing significant alignments: (Bits) Value 3702.AT3G55800.1 115 2e-24 > 3702.AT3G55800.1 Length=393 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 111/212 (52%), Gaps = 17/212 (8%) Query 51 GMTLQELLDRLSLHTDLRSALPTLFEACGCISKALRSTKVTKSGTSNSFGEEQLSVDLLA 110 G +L+E L + + LR+ L + EA I+ +R+ + NSFG+EQL+VD+LA Sbjct 77 GQSLEEFLAQATPDKGLRTLLMCMGEALRTIAFKVRTASCGGTACVNSFGDEQLAVDMLA 136 Query 111 ERQLRDWAKRCSVVKAISSEEETALQEVNA--NGSLVVCWDPLDGSSIIDCNWSVASIFG 168 ++ L + + V K SEE LQ++ G V +DPLDGSSI+D N++V +IFG Sbjct 137 DKLLFEALQYSHVCKYACSEEVPELQDMGGPVEGGFSVAFDPLDGSSIVDTNFTVGTIFG 196 Query 169 IWRIGENGLQWNGPDTLINSTGRQQVAAVLVIYGPRTTALLSVCGV--TVDLQLDAEGGA 226 +W D L TG QVAA + IYGPRTT +L+V G T + L EG Sbjct 197 VWP----------GDKLTGITGGDQVAAAMGIYGPRTTYVLAVKGFPGTHEFLLLDEGKW 246 Query 227 PVILRGPCCIKKNGAKIFSPANLRAAQDLPAY 258 + + K+FSP NLRA D Y Sbjct 247 QHVKE---TTEIAEGKMFSPGNLRATFDNSEY 275 Lambda K H 0.318 0.132 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 80470868093 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40