bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3378_orf1 Length=313 Score E Sequences producing significant alignments: (Bits) Value 326423.RBAM_004270 79.0 2e-13 > 326423.RBAM_004270 Length=249 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 29/253 (11%) Query 52 IRLIAVDIDGTLTKNEEFV-EKNIEGFKLAKKLGIEVVFVTGRDPESAKAVVGRHVMEEV 110 I+LIA+D+DGTL +E+ + E+N K A+ GI VV TGR + R + E + Sbjct 10 IKLIAIDMDGTLLNDEQLIPEENRRAIKEAEAKGIHVVISTGR-----TLMTCRELAESL 64 Query 111 GYAGYPGVYVNGAYVVDRDGLVLVDGPLSKDLQERLLQSFDRHGLN-------TVVFGET 163 + + + NG+ + D D ++ L D ++L ++H N V GE Sbjct 65 ELSSFL-ITANGSEIWDSDFELVERKLLHTDHIQKLWDLRNKHNTNFWASTVDRVWRGEF 123 Query 164 PKGGKGHLREKSDSDSDQYTLAVFEEPSKIDDVLPHLVGEFRE--EIEFTRWAPYAVSVH 221 P+ H Q+ FE D+V ++ E +E E+E T +P + V+ Sbjct 124 PETITDH----------QWLKFGFEIED--DEVRNEVLKELKEYKELEITNSSPINIEVN 171 Query 222 RMEFSKGSGLTALLQQMHIPAEEVLALGNGVNDLPLFEVAATSVCVRDGELEAVQAADYI 281 + +K + L + +++ E V+A+G+ +ND+ + E A V + + + + AD++ Sbjct 172 ALGINKAAALAKVSEKLGFTMENVMAMGDSLNDIAMIEKAGVGVAMGNAQDIVKETADWV 231 Query 282 T-VNSDEGALLAI 293 T VN++ G AI Sbjct 232 TDVNTENGVAKAI 244 Lambda K H 0.319 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 110554944205 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40