bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3387_orf1 Length=149 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_840 258 3e-68 > 5807.cgd8_840 Length=406 Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 116/131 (88%), Positives = 129/131 (98%), Gaps = 0/131 (0%) Query 19 ESARVIREMFGYAKDHQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDE 78 ESARVIREMFGYAKDHQPC+IFMDEIDAIGG+RFSQGTSADREIQRTLMELLNQLDGFDE Sbjct 227 ESARVIREMFGYAKDHQPCVIFMDEIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFDE 286 Query 79 LGQVKIIMATNRPDVLDPALMRPGRLDRKIEIPMPNESARIDILKIHSSKIAKSGDIDFE 138 LG VKIIMATNRPDVLDPAL+RPGRLDRK+EIP+PNE++R++ILKIHSSK+AK G+IDF+ Sbjct 287 LGAVKIIMATNRPDVLDPALLRPGRLDRKVEIPLPNETSRVEILKIHSSKLAKQGEIDFD 346 Query 139 AICRLCDGFNG 149 AIC+LCDGFNG Sbjct 347 AICKLCDGFNG 357 Lambda K H 0.321 0.138 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40